Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948379.1_cds_XP_016489668.1_80164
CDS Infomation

[gene=LOC107809530] [db_xref=GeneID:107809530] [protein=protein TPX2-like isoform X2] [protein_id=XP_016489668.1] [location=join(8097..8271,9008..9154,10276..10365,10669..10822,11451..11550,12059..12109,12635..12732,12818..12896,12966..13025,13219..13305,13541..13599,13807..13885,13956..14021,14112..14174,14343..14417,14517..14551,14688..14691)] [gbkey=CDS]
Sequence

ATGGAGGAAGAGATGATGGAGGATATGGTTGAGTATACGTTTACGGTATTGGAGATTGAC
CTCGATTACGAGTATGATGCTCCGCGTTACTTTGATTTTAGCCATGATGAGTCTCTGCCT
GAGACTCGTCAAGCTGAGAGCTGGTTTGAATCTGCCGGAAGCTATCCTCCTTCTCCTTTT
GTCACTAGGTTAATTCTGAAGGAGGACGATTTGCTGGAAAGCATTAATGTTTCTCCGAAG
ACCAAAGTTGATGAGAACATGAGTTTATCAGATAGTGATTCTGATATTGAGGTCGAGCAA
GGGGTTCCTGGTGCAATAAAAGAAGGCGAGGGGAACAATGCAGGACATTCTGTTAACTTA
GAAATTAGCAATGCCGAGAAACTTTTAAATCAACTAAGGCAGCTGCCTTCAGGGTTGACA
TTCCATAATCACATGGCTAAAGATACCGCAAAAGATCAAACCAGGTGTCCGGGGAAGCCA
TCTTGTCCCAGGACCTCAACCCTCATGAAACCAACCGCAAGTCACTTAGCCAAACAAAAC
CCACTTCGTCCAGTTGGTGAATCGAGGTTAACCACATTTTTGGTTGAGAAAAATGGAACA
AGTTCTGCTGTGGTTGAGACTCAAGCTGCCAAGAGACAAAAACTTGAGAGTGGTCATCTG
CGGAAGGTTGCTGAAGCAAAGCCTGTGTTTAGTTTTGTTCACAAGGCACCTAAGCGAGAT
GGAAAAGTTGATGGCAACAACACATTGGCTAAGCCCAGAATAACTATTCCTAGAGAGCCT
GAGCTTCAAACAACTCATAGAGCACAAAGAGCAAGGCCAAAAGGTAGTGAACAAGCAGAA
AATTTGGCGCCGACAGCTATCCGAAGATTCAAAGCTCTTCCACTGAATAAAAAAATCTTG
GAAGGTCCTTCTATGCCTCCAAAAAGAAGCAATCCACGACTTCCGCAGTTTCAAGAATTT
CACCTGAAGACGTCAGAGAGAGCCGTGCAACATCGTTCAGCCGTTTCAACTTCTGCAGCC
AATTCTTCTACTAGTAACAAGGTGTTGCAGAAGCCCAGTAATAATTCAACCATGGAATGT
GGAAATAGAGAATTCAGAAGAGATAATCATGTAGAGGCTCCAAAGCAGGAGGAATCTACG
TCAACCTACAACTTCAAAGCTCTTCCCCTTAATAAAAAGATCCTATCAAGTAAAGGAGAC
ATTGGAGTGTTCCGAAACACCAAGAGAGAAACCACAGTGCCAATGGAGTTCAATTTTCAT
ACTGAAAAGAGGATTCATCATAATCCGCCAATTGATCTGTTTAATAAGCTATCTCTTACA
TCTGAGCCCCAACCTGCTGGAGTGCAGTTGAAAGCACAAAGACCATCCTTCTTTCCGTCA
AAGAAAATAGATGGGCTTATTTCCAACAAAACCATGAGATAG

Peptide Sequence

PEP ID

XP_016489668.1
PEP Infomation

PREDICTED: protein TPX2-like isoform X2 [Nicotiana tabacum]
Sequence

MEEEMMEDMVEYTFTVLEIDLDYEYDAPRYFDFSHDESLPETRQAESWFESAGSYPPSPF
VTRLILKEDDLLESINVSPKTKVDENMSLSDSDSDIEVEQGVPGAIKEGEGNNAGHSVNL
EISNAEKLLNQLRQLPSGLTFHNHMAKDTAKDQTRCPGKPSCPRTSTLMKPTASHLAKQN
PLRPVGESRLTTFLVEKNGTSSAVVETQAAKRQKLESGHLRKVAEAKPVFSFVHKAPKRD
GKVDGNNTLAKPRITIPREPELQTTHRAQRARPKGSEQAENLAPTAIRRFKALPLNKKIL
EGPSMPPKRSNPRLPQFQEFHLKTSERAVQHRSAVSTSAANSSTSNKVLQKPSNNSTMEC
GNREFRRDNHVEAPKQEESTSTYNFKALPLNKKILSSKGDIGVFRNTKRETTVPMEFNFH
TEKRIHHNPPIDLFNKLSLTSEPQPAGVQLKAQRPSFFPSKKIDGLISNKTMR

Transcript Sequence

Gene sequence data has not been registered.